| Info. | Vol.5 - No.1 (2011.03.20) |
|---|---|
| Title | Genome-wide identification of ethylbenzene and trichloroethylene-regulated genes in human promyelocytic leukemia HL-60 cells |
| Authors | Sailendra Nath Sarma1,2, Mee Song1, Youn-Jung Kim3 & Jae-Chun Ryu1,2 |
| Institutions | 1Cellular and Molecular Toxicology Laboratory, Korea Institute of Science & Technology P.O. Box 131, Cheongryang, Seoul 130-650, Korea 2Department of Pharmacology and Toxicology, University of Science and Technology, Daejeon, Korea 3Department of Applied Chemistry, Kyung Hee University, Yongin 449-701, Korea Correspondence and requests for materials should be addressed to J.-C. Ryu (ryujc@kist.re.kr) |
| Abstract | Ethylbenzene (EBZ) and trichloroethy-lene (TCE), the volatile organic compounds (VOCs) are common constituents of cleaning and degreasing agents, paints, pesticides, personal care products, gasoline and solvents. They are the most common waste chemicals from industry. EBZ is classified as a possible carcinogen and TCE is also classified as a probable carcinogen. This study analyzed the genome-wide expression profiles of human promyelocytic leukemia HL-60 cells exposed to EBZ and TCE using a 35-K whole human genome oligonucleotide microarray. Exposure to EBZ and TCE altered the expression of 106 and 332 up- and also 171 and 856 down-regulated genes individually, 44 genes were up-regulated, and 81 common genes were down-regulated. Genes with a significantly increased expression levels (over 1.5 fold and p-values ⁄0.05) with EBZ and TCE were then classified with gene ontology (GO) and KEGG pathway annotation. Clustering of differentially expressed common genes were associated with RIG-I-like receptor signaling pathway, cytokine-cytokine receptor interaction, toll-like signaling pathway, and small cell lung cancer. GO analysis showed that the major categories in the biological process ontology were immune response, regulation of apoptosis, regulation of programmed cell death, regulation of cell death, and defense response ontology. Functionally important immune response and apoptosis related genes were also validating their expression profiles by quantitative real-time RT-PCR. Thus, this study may provides a valuable information to do further analysis to explore the mechanism of EBZ and TCE induced hematotoxicity. |
| Keyword | Ethylbenzene, Trichloroethylene, Gene expression profiles, Gene ontology, KEGG pathway |
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